Prof. Dr. ASLI ÇAKIR

1-Fidan K, Söylemezoğlu O, Cakir A, Barit G, Dalgiç A, Buyan N. BK virus-associated nephropathy in two pediatric kidney recipients. Transplant Proc. 2008 Jan-Feb;40(1):310-2. 2-Işık Gönül İ, Cakir A, Sözen S, Ataoğlu Ö, Alkibay T. A case of Tubulocystic Carcinoma Simultaneously Occuring with Clear Cell type Renal Cell Carcinoma and Micropapillary Urothelial Carcinoma of Bladder. Southern Medical Journal. 2009 Jul;102(7):754-7. 3-Demirci U, Buğdaycı F, Cakir A, Gürlek B, Gönül II, Büyükberber S, Benekli M, Coşkun U. Bilateral breast cancer in a survivor of acute lymphoblastic leukemia: a case report. Med Oncol. 2010 Jun;27(2):481-3. Epub 2009 May 27. 4-Baykara M, Coskun U, Demirci U, Yildiz R, Benekli M, Cakir A, Buyukberber S. Intracystic papillary carcinoma of the breast: one of the youngest patient in the literature. Med Oncol. 2010 Dec;27(4):1427-8. doi: 10.1007/s12032-009-9290-0. Epub 2009 Aug 13. 5-Ozturk B, Coskun U, Yaman E, Cakir A, Akdemir UO, Yildiz R, Akyol G, Demirci U, Buyukberber S, Tezel E, Benekli M. Adult hepatic epitheloid haemangioendothelioma presenting with Kasabach-Merrit syndrome: a case report. J Clin Pathol. 2009 Nov;62(11):1053-5. 6-Ozturk B, Coskun U, Yaman E, Akdemir O, Cakir A, Memis L, Sezer K, Kaya AO, Yildiz R, Demirci U, Benekli M, Oguz M, Buyukberber S. A case of extra-adrenal paraganglioma localized in retroperitoneum diagnosed with FDG-PET: Case report and review of the literature. The Endocrinologist. March/April 2010; 20(2):60-62 7-Demirci U, Buyukberber S, Cakir A, Ozturk B, Akyurek N, Unver B, Baykara M, Benekli M, Coskun U. Synchronous testicular liposarcoma and prostate adenocarcinoma: a case report. Cases J. 2010 Jan 14;3:27. 8-Emmez H, Kale A, Tönge M, Cakir A, Çeviker N. Two Meningiomas with different histological grades in the same patient. Case report. Neurologia medico-chirurgica. Neurol Med Chir (Tokyo). 2010;50(8):686-8. 9-Salman B, Sakrak O, Yilmaz U, Cakir A, Kerem M, Aydin A. Primary Neuroendocrine Carcinoma in the Breast: A Case Report. Journal Of Breast Cancer 2010 March 13: 1: 115-119. 10-Roa JC, Tapia O, Cakir A, Basturk O, Dursun N, Akdemir D, Saka B, Losada H, Bagci P, Adsay NV. Squamous cell and adenosquamous carcinomas of the gallbladder: clinicopathological analysis of 34 cases identified in 606 carcinomas. Mod Pathol. 2011 Aug; 24(8): 1069-78. doi:10.1038/modpathol.2011.68. Epub 2011 Apr 29. 11-Patel S, Roa JC, Tapia O, Dursun N, Bagci P, Basturk O, Cakir A, Losada H, Sarmiento J, Adsay V. Hyalinizing Cholecystitis and Associated Carcinomas: Clinicopathologic Analysis of a Distinctive Variant of Cholecystitis With Porcelain-like Features and Accompanying Diagnostically Challenging Carcinomas. Am J Surg Pathol. 2011 Aug; 35(8):1104-13. 12-Cakir A, Gönül II, Uluoğlu O. Metaplastic Breast Carcinomas and Their Relationship with Basal-Like Phenotype. Turk Patoloji Derg. 2012;28(2):134-141. doi: 10.5146/tjpath.2012.01112. 13-Cakir A, Isik Gonul I, Uluoglu O. A comprehensive morphological study for basal-like breast carcinomas with comparison to nonbasal-like carcinomas. Diagn Pathol. 2012 Oct 20;7(1):145. doi:10.1186/1746-1596-7-145 14-Dursun N, Escalona OT, Roa JC, Basturk O, Bagci P, Cakir A, Cheng J, Sarmiento J, Losada H, Kong SY, Ducato L, Goodman M, Adsay NV. Mucinous carcinomas of the gallbladder: clinicopathologic analysis of 15 cases identified in 606 carcinomas. Arch Pathol Lab Med. 2012 Nov;136(11):1347-58. doi: 10.5858/arpa.2011-0447-OA.

International congress presentations published as abstracts 1-Three different simultaneous tumors in one patient; clear cell type renal cell carcinoma, low grade collecting ductus carcinoma and micropapillary urothelial carcinoma. 21st European Congress of Pathology, Istanbul, Turkey, 8-13 September 2007. Isik Gonul I, Cakir A, Sozen S, Ataoglu O, Alkibay T. Virchows Archiv 2007, 451(2): p.413. (PP3-78) 2-eNOS and iNOS expression in urothelial tumors of the urinary bladder. 21st European Congress of Pathology, Istanbul, Turkey, 8-13 September 2007. Isik Gonul İ, Cakir A, Akyurek N, Gurocak S, Sozen S, Alkibay T. Virchows Archiv 2007, 451(2): p.416. (PP3-90) 3-Diagnostic usefulness of quantitative 18 F-FDG PET/CT data in the detection of bone marrow involvement in primary staging of lymphoma patients. Annual Congress of the EANM 2009, Barcelona, Spain. Cakir T, Akcora N, Akdemir UO, Karabacak NI, Akyurek N, Cakir A, Ozkurt ZN, Yagci M. European Journal of Nuclear Medicine and Molecular Imaging. October 2009, Vol 36, supplement 2: S241. (OP428) (oral presentation) 4-Squamous Cell and Adenosquamous Carcinomas of the Gallbladder: Clinicopathologic Analysis of 34 Cases. 99th Annual Meeting of United States-and-Canadian-Academy-of-Pathology, Washington, USA, 20-26 March 2010. Cakir A, Tapia O, Roa J, Dursun N, Coban I, Basturk O, Jazaerly T, Akdemir D, Sarmiento J, Adsay NV. Modern Pathology. 2010; 23(1S): 351A, Meeting Abstract: 1562. 5-Intravesicular Papillary-Tubular Neoplasm (IVPN) as a Unifying Category for Mass-Forming Preinvasive Neoplasms of the Gallbladder: An Analysis of 87 Cases. 99th Annual Meeting of United States-and-Canadian-Academy-of-Pathology, Washington, USA, 20-26 March 2010. Dursun N, Roa J, Tapia O, Cakir A, Coban I, Basturk O, Akdemir D, Sarmiento J, Losada H, Adsay NV. Modern Pathology. 2010; 23(1S): 144A, Meeting Abstract: 635. 6-Sclerocalcifying Cholecystitis (SclCC) and Associated Carcinomas: Characterization of a Clinicopathologically Distinct and Challenging Entity. 99th Annual Meeting of United States-and-Canadian-Academy-of-Pathology, Washington, USA, 20-26 March 2010. Patel S, Tapia O, Roa J, Cakir A, Dursun N, Basturk O, Akdemir D, Bandyopadhyay S, Sarmiento J, Coban I, Adsay NV. Modern Pathology 2010; 23(1S): 369A, Meeting Abstract: 1641. 7-Neuroendocrine Carcinomas of the Gallbladder: A Clinicopathologic Analysis of 23 Cases. 99th Annual Meeting of United States-and-Canadian-Academy-of-Pathology, Washington, USA, 20-26 March 2010. Sica G, Dursun N, Roa J, Tapia O, Cakir A, Coban I, Sarmiento J, Basturk O, Ohike N, Cheng J, Adsay NV. Modern Pathology. 2010; 23(1S): 168A. Meeting Abstract: 739. 8- Mucinous Carcinoma (MC) of the Gallbladder (GB): Clinicopathologic Analysis of 14 Cases Identified among 606 GB Carcinomas. 99th Annual Meeting of United States-and-Canadian-Academy-of-Pathology, Washington, USA, 20-26 March 2010. Tapia O, Roa J, Cakir A, Dursun N, Coban I, Basturk O, Cheng J, Sarmiento J, Losada H, Adsay NV. Modern Pathology 2010;23(1S): 372A, Meeting Abstract: 1655. 9-Metaplasia in the Gallbladder: An Analysis of Clinicopathologic Associations in 1218 Cholecystectomies. 100th Annual Meeting United States-and-Canadian-Academy-of-Pathology, San Antonio, TX, USA, 26 February-4 March, 2011. Dursun N, Roa JC, Tapia O, Basturk O, Bandyopadhyay S, Cakir A, Goodman M, Sarmiento J, Losada H, Adsay N. Modern Pathology, 2011; 24 (1S):147A, Meeting Abstract:618.

National congress presentations published as abstracts 1- Cytology and histology correlation in adenoid cystic carcinoma: a case report. Börcek P, Çakır A, Işık Gönül İ, Uyar Göçün P. National Cytopathology Congress, Kuşadası, İzmir, 1-4 March 2007, Proceedings Book: p. 144 (poster no:TBGS-11) 2-Plasmacytoid variant urothelial carcinoma: case report with clinicopathological findings. Çakır A, Işık Gönül İ, Keleş A, Sözen S, Alkibay T. 17th National Congress of Pathology, Istanbul, 8-13 September 2007. Abstract book, p.49, Poster no:NP2-76. 3-High-grade urothelial carcinoma of the renal pelvis with extensive squamous differentiation. Çakır A, Işık Gönül İ, Sözen S, Alkibay T. 17th National Congress of Pathology, Istanbul, 8-13 September 2007. Abstract book, p.50, Poster no:NP2-77. 4-The role of electron microscopy in the diagnosis of renal biopsies: Gazi University Department of Pathology experience. Işık Gönül İ, Çakır A, Memiş L. 18th National Congress of Pathology, Belek, Antalya, 25-29 October 2008. Abstract book, p.12, Poster no: S-019 (oral presentation) 5-A case of cystinosis. Çakır A, Işık Gönül İ, Poyraz A.18th National Congress of Pathology, Belek, Antalya, 25-29 October 2008. Abstract book, p.169, Poster no: P-321 6-Primary mucinous carcinoma of the skin: a case report. Çakır A, Işık Gönül İ. 18th National Congress of Pathology, Belek, Antalya, 25-29 October 2008. Abstract book, p.156, Poster no: P-292 7-Gallbladder adenocarcinomas containing different components: 3 case reports. Çakır A, Işık Gönül İ. 18th National Congress of Pathology, Belek, Antalya, 25-29 October 2008. Abstract book, p.72, Poster no: P-108 8-Serous cystadenoma of the pancreas: a review of 5 cases. Çakır A, Çelik S, Işık Gönül İ, Ekinci Ö, Akyol G.18th National Congress of Pathology, Belek, Antalya, 25-29 October 2008. Abstract book, p.53, Poster no: P-069 9-Monomorphic post-transplant lymphoproliferative disease in a renal transplant patient; peripheral T-cell lymphoma: a case report. Çakır A, Akyürek N. 18th National Congress of Pathology, Belek, Antalya, 25-29 October 2008. Abstract book, p.111, Poster no: P-190 10-HHV-8 (+) Kaposi Sarcoma in the nasopharynx and inguinal lymph node in an HIV (+) patient: A case report. Bağlan T, Yılmaz G, Çakır A, Ekinci Ö, Uluoğlu Ö.18th National Congress of Pathology, Belek, Antalya, 25-29 October 2008. Abstract book, p.129, Poster no: P-228 11-Cutaneous Adenomyoepithelioma: A case report. Çakır A, Erdem Ö. 18th National Congress of Pathology, Belek, Antalya, 25-29 October 2008. Abstract book, p.156, Poster no: P-291 12-Extranodal marginal zone B-cell lymphoma (MALT type) in the parotid gland. Çakır A, Saka B, Erdem Ö, Gönül İI, Göçün PU. 4th National Cytopathology Congress, Ankara. 26-29 March 2009. Abstract book, p. 103, Poster no: P-10 13-Pitfalls and clues in the cytological examination of breast lesions. Göçün PU, Saka B, Çelik S, Çakır A. 4th National Cytopathology Congress, Ankara. 26-29 March 2009. Abstract book, p. 139, Poster no: P-66 14-Rare histopathological findings in PAP smears containing atypical glandular cells: 3 case reports. Saka B, Çelik S, Çakır A, Yılmaz G, Göçün PU. 4th National Cytopathology Congress, Ankara. 26-29 March 2009. Abstract book, p. 160, Poster no: P-97. 15-Squamous cell carcinoma of the cervix: 2 case reports with PAP smear and biopsy findings. Çakır A, Yılmaz I, Gönül II, Erdem Ö, Göçün PU. 4th National Cytopathology Congress, Ankara. 26-29 March 2009. Abstract book, Poster no: P-114. 16-Bilateral breast cancer in a patient with acute lymphoblastic lymphoma in remission: a case report. Demirci U, Buğdaycı F, Çakır A, Gürlek B, Işık Gönül İ, Yıldız R, Büyükberber S, Benekli M, Çoşkun U. 6th National Medical Oncology Congress, Su Sesi Hotel, 24-28 September 2009, Abstract book, p 137, Poster no: 120. 17-What are the most important factors determining tumor volume in prostate carcinomas? Işık Gönül İ, Çakır A, Saka B, Batur AF, Sözen S. 19th National Congress of Pathology, Acapulco Hotel, Cyprus, 7-11 October 2009. Turkish Journal of Pathology, 2009, 25 (supplement), p 10, oral presentation (S-17). 18-Two rare tumors of the bladder: neurofibroma and paraganglioma. Işık Gönül İ, Saka B, Gürocak S, Çakır A, Poyraz A. 19th National Congress of Pathology, Acapulco Hotel, Cyprus, 7-11 October 2009. Turkish Journal of Pathology, 2009, 25 (supplement), p 228, poster no: 533. 19-The importance of electron microscopy in the diagnosis of fibrillary glomerulopathies: 3 case reports. Işık Gönül İ, Ayhan Ö, Çakır A, Memiş L. 19th National Congress of Pathology, Acapulco Hotel, Cyprus, 7-11 October 2009. Turkish Journal of Pathology, 2009, 25 (supplement), p 174, poster no: 391. 20-Limb body wall complex: a case report. Çakır A, Işık Gönül İ, Poyraz A. 19th National Congress of Pathology, Acapulco Hotel, Cyprus, 7-11 October 2009. Turkish Journal of Pathology, 2009, 25 (supplement), p 194, poster no: 444. 21-Hypersensitivity pneumonitis – 3 case reports. Çelik S, Saka B, Çakır A, Akyürek N, Memiş L. 19th National Congress of Pathology, Acapulco Hotel, Cyprus, 7-11 October 2009. Turkish Journal of Pathology, 2009, 25 (supplement), p 211, poster no: 487. 22-Case report: Aortic aneurysm in two siblings with Marfan syndrome. Kula S, Pektaş A, Erer D, Oğuz AD, Tunaoğlu FS, Özdogan ME, Öner AY, Çakır A, Olguntürk R. 9th National Pediatric Cardiology and Cardiovascular Surgery Congress, 05–08 May 2010, Eskişehir, congress book, P079, p 152. 23-The 'Vasculogenic Mimicry' Pattern in Malignant Tumors: A Pilot Study. Çakır A, Işık Gönül İ. 20th National Congress of Pathology, Osmangazi University Congress Center, Eskişehir, 29 September-3 October 2010. Turkish Journal of Pathology, 2010, 26 (supplement), p 63, poster no: 102. 24-Angiomyo(Lipo)matous Hamartoma in an Inguinal Lymph Node: A Case Report. Çakır A, Göçün Uyar P. 20th National Congress of Pathology, Osmangazi University Congress Center, Eskişehir, 29 September-3 October 2010. Turkish Journal of Pathology, 2010, 26 (supplement), p 55, poster no: 83. 25-Epithelioid Angiomyolipoma of the Kidney. Çakır A, Işık Gönül İ, Memiş L. 20th National Congress of Pathology, Osmangazi University Congress Center, Eskişehir, 29 September-3 October 2010. Turkish Journal of Pathology, 2010, 26 (supplement), p 166, poster no: 356. 26-Morphological Features of the Basal-Like Phenotype in Breast Carcinomas and Its Relationship with Prognostic Factors. Çakır A, Işık Gönül İ, Uluoğlu Ö. 20th National Congress of Pathology, Osmangazi University Congress Center, Eskişehir, 29 September-3 October 2010. Turkish Journal of Pathology, 2010, 26 (supplement), p 12, oral presentation (S-21). 27-Metaplastic Carcinoma of the Breast: A Review of 11 Cases. Çakır A, Işık Gönül İ, Uluoğlu Ö. 20th National Congress of Pathology, Osmangazi University Congress Center, Eskişehir, 29 September-3 October 2010. Turkish Journal of Pathology, 2010, 26 (supplement), p 155, poster no: 332. 28-Extraskeletal Myxoid Chondrosarcoma: A Case Report. Yılmaz IB, Bulutay P, Çakır A, Uluoğlu Ö. 20th National Congress of Pathology, Osmangazi University Congress Center, Eskişehir, 29 September-3 October 2010. Turkish Journal of Pathology, 2010, 26 (supplement), p 75, poster no: 132. 29-Heterotopia in the Gallbladder: 2 Case Reports. Çakır A. 22nd National Congress of Pathology, Antalya, 7-11 November 2012. Turkish Journal of Pathology, 2012, 28 (supplement), p 102, Poster no: 193. 30-GATA3 Expression in Breast Carcinomas and Its Relationship with Clinicopathological Parameters. Çakır A, Ekinci Ö, Işık Gönül İ, Çetin B, Benekli M, Uluoğlu Ö. 22nd National Congress of Pathology, Antalya, 7-11 November 2012. Turkish Journal of Pathology, 2012, 28 (supplement), p 14, Oral Presentation (S-24). 31-The immunohistochemical expression profile of stem cell markers CD133 and CD90 in hepatocellular carcinoma, small cell dysplasia and cirrhotic livers, and their relationship with prognosis. Akyol G, Yılmaz G, Çakır A, İlhan M. 22nd National Congress of Pathology, Antalya, 7-11 November 2012. Turkish Journal of Pathology, 2012, 28 (supplement), p 9, Oral Presentation (S-15). Book chapter 1. Erdoğan Y, Deniz PP, Çakır A. 'Pulmonary carcinoid tumors'. Erdoğan Y, Çapan N, Demirağ F (Editors). Rare Tumors of the Thorax. Rekmay Ltd Şti, Ankara, 19-36 (2010).